Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015846225.1_cds_XP_016509565.1_22490
CDS Infomation

[gene=LOC107827023] [db_xref=GeneID:107827023] [protein=uncharacterized protein LOC107827023] [protein_id=XP_016509565.1] [location=complement(join(10416..10556,10961..11011,11086..11185,11378..12124,12214..13163))] [gbkey=CDS]
Sequence

ATGGTTAGTGGATATGAGGTCAGAGAGGCGATTTTTGATATGAGTCCAGCAAGTTTAGCA
GGTCCAGATGGATTCAATAGCACTTTTTATCATAAGTGCTGGTCAATTATTGCTACGGAT
GTCATAGAATTTGTAAAGAGTTTCTTCAATGGCAACAATCTTACAAGATTCTATTCTCAT
ACATGTTTGGTTTTAATACCAAAAGTGGAATCCCCATCAACACTTGCTGAATTCAGGCCA
ATAGGTTTGAGCAACTTTTCTGCTAAGATCATTTCTAAAATATTGGCCAGAAGACTGAAT
CCATTGTTGCCTAAGCTGATTTCAGAGAATCAAAGTGGATTTGTGAAGGGACGACTCATC
ACTTATAATGTGCTGCTTACTCAAGAAATAATTCATGGGATATCGGATCCTAATACAGGG
GGAAATATGGTGATAAAACTGGATATGGCTAAAGCGTATGACAGAGTATCTTGGGAGTTC
CTATTATCTGTCATAAGGAACTTTGATTTCTCTAGCTGGTGGACTGAGATAATTGGTAGG
CTGATCTCAGAAGTATGGTACTCGATCATTGTTAATGGCACAAGGAGGGGTTTCTTCACC
TCATCTCAAGGCTTGAAACAAGGGGATCGTTTATCCCCATCTTTATTTATCTTAGGAGCT
GAGGTCTTCTCTAGATTATTGAATAGACTATATGATGATCAGAGGTTTATTCCATTTTCT
ATGAACAATAGAGGGCCTAAAATCAACCATCTGGCGTACGCAGATGACATGGTTATATTT
TGCGGAGGGAAGAGTAAGTCGATAAAGCTGGTGATGAAGCAGATTAGGCTCTATGAAAAG
AGCTCTGGACAGAAAGTGAACGAAGACAAGAGCTTCTTTTGTACGTCTCCAAAAGTATCT
ATTTCCAGGGATAACATGATGATAGATAAGACTGGTTATAAGCATAAACAAATCTCTGGT
TGGAAATGCAAGCTACTGTCCAGTGGAGGAAAAGCGATATTGATCAAGCATGTACTTCAA
GCACATACCTTAGCAGCAATGAACCCTCCTAAGGGCACTCTAAAATTAATGCAAAGGCAT
TTGGCGAGATTCTTTTGGGGTACAAGCAATGATAAGCAAAGATATCATTGGTCTGCTTGG
GAAAATCTATGCTATTCTAAAGAGGAAGGAGGAATTGGAATAAAGAGAATGGAAGCAATT
AGTGACTCATTTGCTTATCAAAGGTGGTGGAAATTCAGAACTGAAGATTCTCTATGGGCA
TCACTCTTGAGAGCAAAGTACTGCTCAAGAGTACATCCTGTAGCTAAAGCCAGTAGCTCA
AAACAATCCCATTCATGGGGAAAGTTGATGCAGATCAAGAGGAAAGCAGAACAGAACCTC
ACTTGGAAAATACAAATGGGCAACAACAATTTAAGGTGGGATAACTGGACAGGAAAAGGA
GCATTGGCTGAACTAATTCCATGTCAAGCAAAGTTTGCTAAAGACAAGGTGGAAGATTAT
ATTCAAGGAGGTACATGGAATGTTATGAAGTTAGCAAAGATCATACCTGTACACATTATT
AGCCAAATTACCAAATTAATGATTGGAGATAAAAATACACAAGACTATGCTATTTGGGAC
CCTGCAGCAGATGGACAATTTTCAACCAAGTCGACTCATCACCTTACTAGAACTCCAAGG
CAGAAGGATCAATTCAGAATGTGGAAGAAATTAGGTGGACCTTTGGGCATTGATGTTAAT
GCTATATCTATTAACAACATGCTAAGGAAATGGTGGAAAATTAAACCGAAGAATGGGATA
TGGGGAACAGAAGAAAATGTGGCAGAGAACCATGGAACACCAGATTTGGATTCAATTGAT
GCATTAAGGCAGACTATTCTCCAGCTAAATTGCACAGTATCTCATTATTTTAGAGAAGCG
AACCAGAATGTTGATAGCTTGGCGAAGTTTGCAGCTGGATTAGTTGATCCTTGTATGTAT
TTTGACTAG

Peptide Sequence

PEP ID

XP_016509565.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107827023 [Nicotiana tabacum]
Sequence

MVSGYEVREAIFDMSPASLAGPDGFNSTFYHKCWSIIATDVIEFVKSFFNGNNLTRFYSH
TCLVLIPKVESPSTLAEFRPIGLSNFSAKIISKILARRLNPLLPKLISENQSGFVKGRLI
TYNVLLTQEIIHGISDPNTGGNMVIKLDMAKAYDRVSWEFLLSVIRNFDFSSWWTEIIGR
LISEVWYSIIVNGTRRGFFTSSQGLKQGDRLSPSLFILGAEVFSRLLNRLYDDQRFIPFS
MNNRGPKINHLAYADDMVIFCGGKSKSIKLVMKQIRLYEKSSGQKVNEDKSFFCTSPKVS
ISRDNMMIDKTGYKHKQISGWKCKLLSSGGKAILIKHVLQAHTLAAMNPPKGTLKLMQRH
LARFFWGTSNDKQRYHWSAWENLCYSKEEGGIGIKRMEAISDSFAYQRWWKFRTEDSLWA
SLLRAKYCSRVHPVAKASSSKQSHSWGKLMQIKRKAEQNLTWKIQMGNNNLRWDNWTGKG
ALAELIPCQAKFAKDKVEDYIQGGTWNVMKLAKIIPVHIISQITKLMIGDKNTQDYAIWD
PAADGQFSTKSTHHLTRTPRQKDQFRMWKKLGGPLGIDVNAISINNMLRKWWKIKPKNGI
WGTEENVAENHGTPDLDSIDALRQTILQLNCTVSHYFREANQNVDSLAKFAAGLVDPCMY
FD

Transcript Sequence

Gene sequence data has not been registered.